Publications
2023
- Program your favorite data science pipeline in Spark. in Conference contribution at the open access repository figshare, 2023. Extended version of a programming project published in Proceedings of the 11th Workshop on Education for High-Performance Computing (EduHPC 2023), November 13, 2023, Denver, CO, USA. more ... :
- Peachy parallel assignments (EduHPC 2023). in Proceedings of the SC 2023 Workshops of the International Conference on High Performance Computing, Network, Storage, and Analysis (SC-W 2023), November 12-17, 2023, Denver, CO, USA, pages 366-373, New York, NY, USA, 2023. ACM. more ... :
- Experimente zur Technischen Informatik: Praxisorientierte Trainingseinheiten. in Cuvillier, Göttingen, Deutschland, 2023. Mit Beiträgen von V. Dörsing, A. Knoth, W. Koch, D. Neuhäuser, A. Reinsch, R. Seidler und D. Walther. more ... :
2022
- MusicDress: A heterogeneous dataset for comparing music recommender systems. in P. Ceravolo, C. Guetl, Y. Jararweh, and E. Benkhelifa, editors, Proceedings of the 9th International Conference on Social Networks Analysis, Management and Security (SNAMS 2022), Milan, Italy, November 28-December 1, 2022, pages 1-4. IEEE, 2022. more ... :
- Peachy parallel assignments (EduPar 2022). in Proceedings of the 2022 IEEE 36th International Parallel and Distributed Processing Symposium Workshops (IPDPSW 2022), May 30-June 3, 2022, pages 361-368, Los Alamitos, CA, USA, 2022. IEEE Computer Society. more ... :
2021
- Study of the numerical efficiency of structured abs-normal forms. in Optimization Methods and Software, 36(5):909-933, 2021. more ... :
- Efficient signed backward substitution for piecewise affine functions via path problems in a directed acyclic graph. in M. Bender, J. Gilbert, B. Hendrickson, and D. B. Sullivan, editors, Proceedings of the 2021 SIAM Conference on Applied and Computational Discrete Algorithms (ACDA 21), July 19-21, 2021, pages 171-181, Philadelphia, PA, USA, 2021. SIAM. more ... :
2020
- An inexact combinatorial model for maximizing the number of discovered nonzero entries. in H. M. Bücker, X. S. Li, and S. Rajamanickam, editors, 2020 Proceedings of the Ninth SIAM Workshop on Combinatorial Scientific Computing, Seattle, Washington, USA, February 11-13, 2020, pages 32-44, Philadelphia, PA, USA, 2020. SIAM. more ... :
- Preconditioning Jacobian systems by superimposing diagonal blocks. in V. V. Krzhizhanovskaya, G. Zavodszky, M. H. Lees, J. J. Dongarra, P. M. A. Sloot, S. Brissos, and J. Teixeira, editors, Computational Science - ICCS 2020, Proceedings of the 20th International Conference on Computational Science, Amsterdam, The Netherlands, June 3-5, 2020. Part II, volume 12138 of Lecture Notes in Computer Science, pages 101-115, Cham, Switzerland, 2020. Springer International Publishing. more ... :
- On the complementary equienergetic graphs. in MATCH Communications in Mathematical and in Computer Chemistry, 83(3):555-570, 2020. more ... :
- SHEMAT-Suite: An open-source code for simulating flow, heat and species transport in porous media. in SoftwareX, 12:100533, 2020. more ... :
- Automatisierte Anbindung von Simulations- und Optimierungssoftware zur parallelen Lösung inverser Problemklassen. in Dissertation, Department of Mathematics and Computer Science, Friedrich Schiller University Jena, Jena, 2020. more ... :
- Über Digitalisierung und deren zugrunde liegende Methoden: Datengetriebene und simulationsgestützte Wissenschaften im Michael-Stifel-Zentrum Jena. in Die Digitalisierung und ihre Auswirkungen auf Mensch und Gesellschaft: Gemeinsame Vortragsreihe des Collegium Europaeum Jenense, des Michael-Stifel-Zentrums Jena und des Instituts für Informatik im Wintersemester 2018/19, volume 2 of Berichte des Collegium Europaeum Jenense, pages 6-12. Collegium Europaeum Jenense, 2020. more ... :
- An exact formula for the Wiener polarity index of nanostar dendrimers. in Journal of Information and Optimization Sciences, 41(4):933-939, 2020. more ... :
- Preface to the workshop proceedings. in 2020 Proceedings of the Ninth SIAM Workshop on Combinatorial Scientific Computing, Seattle, Washington, USA, February 11-13, 2020, Philadelphia, PA, USA, 2020. SIAM. Editorial. more ... :
- Can scientific computing and combinatorial mathematics work together? Solving real-world problems in computational and data science. in SIAM News online, 2020. SIAM. Electronically published November 12, 2020. more ... :
2019
- A short note on hyper Zagreb index. in Boletim da Sociedade Paranaense de Matematica, 37(2):51-58, 2019. more ... :
- Automatic reproducibility and parallelism for biological image analysis workflows. in Dissertation, Department of Mathematics and Computer Science, Friedrich Schiller University Jena, Jena, 2019. more ... :
- (Almost) matrix-free solver for piecewise linear functions in abs-normal form. in Numerical Linear Algebra with Applications, 26(5):e2258, 2019. more ... :
- Redesigning interactive educational modules for combinatorial scientific computing. in J. M. F. Rodrigues, P. J. S. Cardoso, J. Monteiro, R. Lam, V. V. Krzhizhanovskaya, M. H. Lees, J. J. Dongarra, and P. M. A. Sloot, editors, Computational Science - ICCS 2019, Proceedings of the 19th International Conference on Computational Science, Faro, Portugal, June 12-14, 2019. Part V, volume 11540 of Lecture Notes in Computer Science, pages 363-373, Cham, Switzerland, 2019. Springer International Publishing. more ... :
2018
- New bounds on the hyper-Zagreb index for the simple connected graphs. in Electronic Journal of Graph Theory and Applications, 6(1):166-177, 2018. more ... :
- Estimating the expansion coefficients of a geomagnetic field model using first-order derivatives of associated Legendre functions. in Optimization Methods & Software, 33(4-6):924-944, 2018. more ... :
- The story of an experiment: A provenance-based semantic approach towards research reproducibility. in A. Waagmeester, C. J. O. Baker, A. Splendiani, O. D. Beyan, and M. S. Marshall, editors, Proceedings of the 11th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2018), Antwerp, Belgium, December 3-6, 2018, volume 2275 of CEUR Workshop Proceedings. CEUR-WS.org, 2018. more ... :
- On parallelizing Benson's algorithm: Limits and opportunities. in O. Gervasi, B. Murgante, S. Misra, E. Stankova, C. Torre, A. M. Rocha, D. Taniar, B. Apduhan, E. Tarantino, and Y. Ryu, editors, Computational Science and Its Applications - ICCSA 2018, Proceedings of the International Conference on Computational Science and its Applications, Melbourne, Australia, July 2-5, 2018. Part II, volume 10961 of Lecture Notes in Computer Science, pages 653-668, Cham, Switzerland, 2018. Springer International Publishing. more ... :
- Correcting the number of L-borderenergetic graphs of order 9 and 10. in MATCH Communications in Mathematical and in Computer Chemistry, 79(2):311-319, 2018. more ... :
- More on inverse degree and topological indices of graphs. in Filomat, 32(1):165-178, 2018. more ... :
2017
- Automatic differentiation of computer programs in the time and frequency domain. in Proceedings of the 2017 European Conference on Electrical Engineering and Computer Science EECS, Bern, Switzerland, November 17-19, 2017, pages 335-340, Los Alamitos, CA, USA, 2017. IEEE Computer Society. more ... :
- On the bounds of forgotten topological index. in Turkish Journal of Mathematics, 41(6):1687-1702, 2017. more ... :
- On the reproducibility of biological image workflows by annotating computational results automatically. in X. Hu, Y. Gong, C.-R. Shyu, D. Korkin, Y. Bromberg, I. Yoo, J. Gao, and J. H. Zheng, editors, Proceedings of the IEEE International Conference on Bioinformatics and Biomedicine (BIBM 2017), Kansas City, MO, USA, November 13-16, 2017, pages 1538-1545. IEEE, 2017. more ... :
- Correcting a paper on Randic and geometric-arithmetic index. in Turkish Journal of Mathematics, 41(1):27-32, 2017. more ... :
- An online scripting language for teaching combinatorial scientific computing. in W. Amme and T. S. Heinze, editors, Programmiersprachen und Grundlagen der Programmierung, 19. Kolloquium, KPS 2017, Weimar, 25.-27. September, 2017, Tagungsband, Jenaer Schriften zur Mathematik und Informatik Math/Inf/02/2017, pages 83-85, Jena, 2017. Friedrich-Schiller-Universität Jena. Extended abstract. more ... :
- Combining partial Jacobian computation and preconditioning: New heuristics, educational modules, and applications. in Dissertation, Department of Mathematics and Computer Science, Friedrich Schiller University Jena, Jena, 2017. Also published by Cuvillier Verlag, Göttingen. more ... :
- Towards reproducibility of microscopy experiments. in D-Lib Magazine, 23(1/2), 2017. more ... :
2016
- Verbundprojekt MeProRisk II: Optimierungsstrategien und Risikoanalyse für tiefe geothermische Reservoire - eine Machbarkeitsstudie: Teilprojekt F: Paralleles Rechnen und optimale Versuchsplanung. in Abschlussbericht des Verbundprojektes, Verbund-Nummer 01102405, Förderkennzeichen BMBF 0325389F, Friedrich-Schiller-Universität Jena, Fakultät für Mathematik und Informatik, Lehrstuhl für Advanced Computing, 2016. more ... :
- Optimal experimental design for reservoir property estimates in geothermal exploration. in Computational Geosciences, 2(2):357-383, 2016. more ... :
- Enabling implicit time integration for compressible flows by partial coloring: A case study of a semi-matrix-free preconditioning technique. in A. H. Gebremedhin, E. G. Boman, and B. Uccar, editors, 2016 Proceedings of the Seventh SIAM Workshop on Combinatorial Scientific Computing, Albuquerque, New Mexico, USA, October 10-12, 2016, pages 23-32, Philadelphia, PA, USA, 2016. SIAM. more ... :
- On the bounds of the first reformulated Zagreb index. in Turkish Journal of Analysis and Number Theory, 4(1):8-15, 2016. more ... :
- New sharp lower bounds for the first Zagreb index. in Scientific Publications of the State University of Novi Pazar, 8(1):11-19, 2016. more ... :
2015
- An educational module illustrating how sparse matrix-vector multiplication on parallel processors connects to graph partitioning. in S. Hunold, A. Costan, D. Gimenez, A. Iosup, L. Ricci, M. E. Gomez Requena, V. Scarano, A. L. Varbanescu, S. L. Scott, S. Lankes, J. Weidendorfer, and M. Alexander, editors, Euro-Par 2015: Parallel Processing Workshops, Euro-Par 2015 International Workshops, Vienna, Austria, August 24-28, 2015, Revised Selected Papers, volume 9523 of Lecture Notes in Computer Science, pages 135-146, Cham, Switzerland, 2015. Springer. more ... :
- Optimal experimental design for finding optimally located boreholes in geothermal engineering. in Proceedings World Geothermal Congress 2015, April 19-25, 2015, Melbourne, Australia, pages 22101:1-22101:3. The International Geothermal Association, 2015. Extended abstract. more ... :
- Interactively exploring the connection between bidirectional compression and star bicoloring. in S. Koziel, L. Leifsson, M. Lees, V. V. Krzhizhanovskaya, J. Dongarra, and P. M. A. Sloot, editors, International Conference on Computational Science, ICCS 2015 - Computational Science at the Gates of Nature, Reykjavik, Iceland, June 1-3, 2015, volume 51 of Procedia Computer Science, pages 1917-1926. Elsevier, 2015. more ... :
- Exploring the design space of signed-binary adder cells. in N. Mastorakis, A. Bulucea, and G. Tsekouras, editors, Computational Problems in Science and Engineering, volume 343 of Lecture Notes in Electrical Engineering, pages 367-385. Springer, Cham, Switzerland, 2015. more ... :
- The approximate discrete Radon transform on graphics processing units: A case study in auto-tuning of OpenCL implementations. in IEEE 9th International Symposium on Embedded Multicore/Many-core Systems-on-Chip, MCSoC 2015, Turin, Italy, September 23-25, 2015, pages 219-226, Los Alamitos, CA, USA, 2015. IEEE Computer Society. more ... :
- The non-symmetric s-step Lanczos algorithm: Derivation of efficient recurrences and synchronization-reducing variants of BiCG and QMR. in International Journal of Applied Mathematics and Computer Science, 25(4):769-785, 2015. more ... :
- RIOS: Efficient I/O in reverse direction. in Software: Practice and Experience, 45(10):1399-1427, 2015. more ... :
2014
- ERNA - embedded, self-calibrating robotic-arm for gamificated learning. in P. Dondon, B. K. Bose, D. S. Naidu, I. Rudas, and S. Kartalopoulos, editors, Communications, Circuits and Educational Technologies, Proceedings of the 2014 International Conference on Education and Educational Technologies II (EET'14), Prague, Czech Republic, April 2-4, 2014, pages 19-24. EUROPMENT, 2014. more ... :
- Turning a serial forward code into a parallel inverse code: A case study from geothermal engineering. in K. Psarris, P. Borne, I. Rudas, and Y. S. Shmaliy, editors, Computers, Automatic Control, Signal Processing and Systems Science, Proceedings of the 2014 International Conference on System, Control, Signal Processing and Informatics II (SCSI'14), Prague, Czech Republic, April 2-4, 2014, volume 33 of Recent Advances in Electrical Engineering Series, pages 22-25. EUROPMENT, 2014. more ... :
- Graphtea: Interactive graph self-teaching tool. in P. Dondon, B. K. Bose, D. S. Naidu, I. Rudas, and S. Kartalopoulos, editors, Communications, Circuits and Educational Technologies, Proceedings of the 2014 International Conference on Education and Educational Technologies II (EET'14), Prague, Czech Republic, April 2-4, 2014, pages 48-51. EUROPMENT, 2014. more ... :
- Benchmarking different MapReduce implementations for computer-aided hardware development. in Proceedings of 2014 International Conference on Mathematics and Computers in Sciences and in Industry, MCSI 2014, Varna, Bulgaria, September 13-15, 2014, pages 15-21, Los Alamitos, CA, USA, 2014. IEEE Computer Society. more ... :
- Illustrating a graph coloring algorithm based on the principle of inclusion and exclusion using GraphTea. in C. Rensing, S. de Freitas, T. Ley, and P. J. Mu noz Merino, editors, Open Learning and Teaching in Educational Communities, Proceedings of 9th European Conference on Technology Enhanced Learning, EC-TEL 2014, Graz, Austria, September 16-19, 2014, volume 8719 of Lecture Notes in Computer Science, pages 514-517, Cham, Switzerland, 2014. Springer. more ... :
- Thread Block Lock Free Format für dünnbesetzte Matrix-Vektor-Produkte auf Grafikkarten. in Verlag GmbH, Bonn, 2014. more ... :
- A new approach to visualizing general trees using thickness-adjustable quadratic curves. in C. Duncan and A. Symvonis, editors, Graph Drawing, Proceedings of 22nd International Symposium on Graph Drawing, GD 2014, Würzburg, Germany, September 24-26, 2014, volume 8871 of Lecture Notes in Computer Science, pages 525-526, Berlin, Germany, 2014. Springer. Extended abstract for poster. more ... :
- Characteristics of testing conditions for constitutive models in metal plasticity. in Journal of Engineering Mathematics, 88(1):99-119, 2014. more ... :
- Reformulating a breadth-first search algorithm on an undirected graph in the language of linear algebra. in Proceedings of 2014 International Conference on Mathematics and Computers in Sciences and in Industry, MCSI 2014, Varna, Bulgaria, September 13-15, 2014, pages 33-35, Los Alamitos, CA, USA, 2014. IEEE Computer Society. more ... :
- A distributed-memory parallelization of a shared-memory parallel ensemble Kalman filter. in F. Winkler, V. Negru, T. Ida, T. Jebelean, D. Petcu, S. Watt, and D. Zaharie, editors, Proceedings of the 16th International Symposium on Symbolic and Numeric Algorithms for Scientific Computing (SYNASC 2014), September 22-25, 2014, Timisoara, Romania, pages 455-462, Los Alamitos, CA, USA, 2014. IEEE Computer Society. more ... :
- Preservation of non-uniform memory architecture characteristics when going from a nested OpenMP to a hybrid MPI/OpenMP approach. in M. S. Obaidat, J. Kacprzyk, and T. Ören, editors, SIMULTECH 2014, Proceedings of the 4th International Conference on Simulation and Modeling Methodologies, Technologies and Applications, Vienna, Austria, August 28-30, 2014, pages 286-291. SCITEPRESS, 2014. more ... :
- Simultaneous optimization of working fluid and process for Organic Rankine Cycles (ORCs) using PC-SAFT. in Industrial & Engineering Chemistry Research, 53(21):8821-8830, 2014. more ... :
- Explorative analysis of heterogeneous, unstructured, and uncertain data: A computer science perspective on biodiversity research. in M. Helfert, A. Holzinger, O. Belo, and C. Francalanci, editors, Proceedings of the 3rd International Conference on Data Management Technologies and Applications, DATA 2014, Vienna, Austria, August 29-31, 2014, pages 251-257. SCITEPRESS, 2014. more ... :
- Interactively exploring the connection between nested dissection orderings for parallel Cholesky factorization and vertex separators. in IEEE 28th International Parallel and Distributed Processing Symposium, IPDPS 2014 Workshops, Phoenix, Arizona, USA, May 19-23, 2014, pages 1122-1129, Los Alamitos, CA, USA, 2014. IEEE Computer Society. more ... :
- Redesigning the EFCOSS framework toward finding optimally located boreholes in geothermal engineering. in I. Horvat and Z. Rusak, editors, Proceedings of the tenth international symposium on tools and methods of competitive engineering (TMCE 2014), May 19-23, 2014, Budapest, Hungary, pages 831-842, 2014. more ... :
- On the design of the EFCOSS software architecture when using parallel and distributed computing. in A. Holzinger, T. Libourel, L. A. Maciaszek, and S. J. Mellor, editors, Proceedings of 9th International Conference on Software Engineering and Applications, ICSOFT-EA, Vienna, Austria, August 29-31, 2014, pages 445-454. SCITEPRESS, 2014. more ... :
- Modellentwicklung für den Schleifprozess zur zeit- und qualitätsoptimierten Bearbeitung optischer Funktionsflächen. in Dissertation, Department of Mathematics and Computer Science, Friedrich Schiller University Jena, Jena, 2014. more ... :
- Interactive educational modules illustrating sparse matrix computations and their corresponding graph problems. in Verlag GmbH, Bonn, 2014. more ... :
2013
- Latency-aware digital audio processing on Linux. in Dissertation, Department of Mathematics and Computer Science, Friedrich Schiller University Jena, Jena, 2013. more ... :
- Identification of optimal material models and parameters in finite strain plasticity. in Proceedings in Applied Mathematics and Mechanics, 13(1):335-336, 2013. more ... :
- An interactive educational module illustrating sparse matrix compression via graph coloring. in 2013 International Conference on Interactive Collaborative Learning (ICL), Proceedings of the 16th International Conference on Interactive Collaborative Learning, Kazan, Russia, September 25-27, 2013, pages 330-335, Piscataway, NJ, 2013. IEEE. more ... :
- A normalization scheme for the non-symmetric s-step Lanczos algorithm. in R. Aversa, J. Kolodziej, J. Zhang, F. Amato, and F. Giancarlo, editors, Algorithms and Architectures for Parallel Processing, Proceedings of 13th International Conference, ICA3PP 2013, Vietri sul Mare, Italy, December 18-20, 2013, Part II, volume 8286 of Lecture Notes in Computer Science, pages 30-39, Cham, Switzerland, 2013. Springer. more ... :
- Synchronization-reducing variants of the biconjugate gradient and the quasi-minimal residual methods. in J. Kolodziej, B. Di Martino, D. Talia, and K. Xiong, editors, Algorithms and Architectures for Parallel Processing, Proceedings of 13th International Conference, ICA3PP 2013, Vietri sul Mare, Italy, December 18-20, 2013, Part I, volume 8285 of Lecture Notes in Computer Science, pages 226-235, Cham, Switzerland, 2013. Springer. more ... :
- Model identification for flow simulations in geothermal reservoirs: Towards optimally drilling boreholes. in Proceedings in Applied Mathematics and Mechanics, 13(1):345-346, 2013. more ... :
- Analyse von Sensitivitäten bei der Modellierung des Grobblechwalzens. in G. Hirt, editor, Umformtechnik: Stahl und NE-Metalle - Vom Werkstoff zum Produkt. Tagungsband des 28. Aachener Stahlkolloquiums, Aachen, 7./8. März 2013, pages 111-122, Aachen, 2013. Mainz. more ... :
2012
- Design and Evaluation of Computer Arithmetic Based on Carry-Save and Signed-Digit Redundant Number Representation. in Dissertation, Department of Mathematics and Computer Science, Friedrich Schiller University Jena, Jena, 2012. more ... :